Truncation, N-loss, or C-loss

Truncation of gene transcript

Truncation of the gene transcript that can lead to either N or C-terminus loss of the protein.

First line must be the header line, with following columns

• gene

  • Gene symbol.

• isoform

  • RefSeq/Ensembl accession of the isoform.

• rnaPosition

  • RNA nucleotide position of the break point on this gene.

• Losstype

  • “n” for N-loss, “c” for C-loss.

Optional columns:

• Patient
• Sample
• Sampletype
• disease

Data lines starting with ”#” will be ignored.