Copy Number Variants

CNV format

This format only works for gene-level CNV data.

First line must be the header with following columns:

• Gene

  • The gene name

• Cnv

  • Allowed values:

    • Amplification
    • Gain
    • Deletion
    • loss

Following columns are optional:

• Sample
• Patient
• Sampletype
• Disease

Lines starting with ’#’ will be ignored.